A Proteomics-Driven Machine Learning Tool for Distinguishing ET from pre-PMF
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Published:
July 23, 2025
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Authors:
['Zhang L', 'Wen Q', 'Sun T', 'Yu D', 'Mankai J', 'Xiaofan L', 'Huiyuan L', 'Fu R', 'Liu W', 'Xue F', 'Dong H', 'Xinyue D', 'Wang W', 'Chi Y', 'Renchi Y', 'Chen Y.']
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Category:
Oncology
Uncover the hidden differences between essential thrombocythemia and pre-myelofibrosis with a cutting-edge proteomic tool that outperforms clinical predictors, paving the way for more accurate early-stage MPN diagnosis.
This study leveraged data-independent acquisition (DIA)-based proteomic profiling of bone marrow samples from 434 essential thrombocythemia (ET) and 91 pre-myelofibrosis (pre-PMF) patients. A 9-protein classifier was developed using machine learning, achieving superior diagnostic performance (AUC=0.895) compared to clinical variables alone (AUC=0.499). The proteomic model was particularly robust in distinguishing JAK2V617F+ and CALR+ subtypes, offering a reproducible, molecular-based approach for early-phase MPN diagnosis. This innovative tool has the potential to transform the clinical management of these phenotypically similar yet biologically distinct myeloproliferative neoplasms.